PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057561.4

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 667aa MW: 75188.4 Da PI: 8.567

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057561.4	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.4	5.4e-07	273	318	2	41
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 + r+C+ ++e ++ l+C+ ++ lC C e H+ Ht++ Oeu057561.4 273 QDRMCDFCGETKALLYCRADSAKLCLGCDREVHSTnqlfkkHTRCL 318 789*****99*******************6688999999875 PP
2	zf-B_box	21.3	5.7e-07	319	360	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42 C+++++ +++++C + + lC++C e+H + H+++p+ Oeu057561.4 319 LCDKCDSSPVSIYCCTESLVLCQNCDWEKHDNlrliHDRRPI 360 6*****************************889999999886 PP
3	CCT	62.1	1.8e-21	622	664	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R+ a++RYkeK+ktR+F+K+irYesRK++AesR R+KGrF+k Oeu057561.4 622 RDLAISRYKEKKKTRRFDKHIRYESRKVRAESRTRIKGRFAKI 664 7889*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MKKGGGVSED AKKGGKKFNG PDSIKSKKKM VKKNMQRLGG AGLSLEAFAN AKTRNDNYNP 60 ALIKKQREFY KNAKYVQKFK RSLKQQEQQN DPSTISRPLE DENETEEVRN AEQKNKNGKK 120 KSQSLEELYK KKHEEQEKAR LEREAIIQAA KEKREKTDAK RKSLKEKMYK KTRPKKQQAA 180 HEVLRLESEA AHVNSKPSHI NREKFVELNS EKMYLAVSSG DTMVSSGSVV AHRHEFFWRY 240 NVALLQLVGC CNGGLHIKSS IFEQENSTVA DSQDRMCDFC GETKALLYCR ADSAKLCLGC 300 DREVHSTNQL FKKHTRCLLC DKCDSSPVSI YCCTESLVLC QNCDWEKHDN LRLIHDRRPI 360 EGYNGCPSVS ELMSILGFED LGKKNSLGDG NEGGNEGLFS DVLIWKTPSI VSLDDLIVSS 420 DNCVDAGHSF QSIGVPPLPK ILALLLVLLF DSLTLIGVCL ASLSWILTSF VTLLLNQNRN 480 AACGKHRQEI LCQLREMAKT EPNFDDFVED LKPHFELEPQ GNYQLKDSSR GLEHYVDPAL 540 GSFHEFLLCG DSGGVADQDF SSALLGSYID TNHLVPDKDS DVGESPFQSN GCQEGQSCVP 600 VNSRPFEAIP KVAARELNSQ ERDLAISRYK EKKKTRRFDK HIRYESRKVR AESRTRIKGR 660 FAKIER*

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MKKGGGVSED AKKGGKKFNG PDSIKSKKKM VKKNMQRLGG AGLSLEAFAN AKTRNDNYNP  60
ALIKKQREFY KNAKYVQKFK RSLKQQEQQN DPSTISRPLE DENETEEVRN AEQKNKNGKK  120
KSQSLEELYK KKHEEQEKAR LEREAIIQAA KEKREKTDAK RKSLKEKMYK KTRPKKQQAA  180
HEVLRLESEA AHVNSKPSHI NREKFVELNS EKMYLAVSSG DTMVSSGSVV AHRHEFFWRY  240
NVALLQLVGC CNGGLHIKSS IFEQENSTVA DSQDRMCDFC GETKALLYCR ADSAKLCLGC  300
DREVHSTNQL FKKHTRCLLC DKCDSSPVSI YCCTESLVLC QNCDWEKHDN LRLIHDRRPI  360
EGYNGCPSVS ELMSILGFED LGKKNSLGDG NEGGNEGLFS DVLIWKTPSI VSLDDLIVSS  420
DNCVDAGHSF QSIGVPPLPK ILALLLVLLF DSLTLIGVCL ASLSWILTSF VTLLLNQNRN  480
AACGKHRQEI LCQLREMAKT EPNFDDFVED LKPHFELEPQ GNYQLKDSSR GLEHYVDPAL  540
GSFHEFLLCG DSGGVADQDF SSALLGSYID TNHLVPDKDS DVGESPFQSN GCQEGQSCVP  600
VNSRPFEAIP KVAARELNSQ ERDLAISRYK EKKKTRRFDK HIRYESRKVR AESRTRIKGR  660
FAKIER*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	1e-78	CO-like family protein