PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu057530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 135aa MW: 15108.2 Da PI: 9.0009 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 147.3 | 4.1e-46 | 9 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kllk+l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+++l ++k Oeu057530.1 9 PCAACKSLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLKELQPHQREDAVNSLAYEAEMRLRDPVYGCVGVISVLQHQLRQLQTDLRYAK 106 7**********************************************************************************************999 PP DUF260 99 ee 100 +e Oeu057530.1 107 SE 108 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MASSSSNSPC AACKSLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLKELQPH 60 QREDAVNSLA YEAEMRLRDP VYGCVGVISV LQHQLRQLQT DLRYAKSELS KYKNLGHDGL 120 IEASTHHHHH PRST* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 7e-57 | LBD family protein |