PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055578.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 158aa    MW: 18030.5 Da    PI: 5.2562
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055578.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF21.62.7e-072222242
                 HHHHHHHHHHT-EEEEEEE-T CS
       SRF-TF 22 KKAeELSvLCdaevaviifss 42
                  K +EL++LCd++ ++ii++ 
  Oeu055578.1  2 NKMNELCTLCDIQGCIIIYGA 22
                 6889***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MNKMNELCTL CDIQGCIIIY GAHEPQPTVW PSPLDAQQII SRFRELPEME QTQRLFNQES  60
YMIQRVQKSH KQAEKFQRIN RLTDMEIQMH QCMAGLSSLQ NAPLNDITEM GRLAEQNMQD  120
IMARMEELEK NRATTLQMGG TSSSPPRDDA AGPSFRN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-25M-type_MADS family protein