PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055350.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 331aa    MW: 37163 Da    PI: 5.3362
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055350.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.41.2e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+e l  +v+++G g Wk I +          R+  ++k++w+++
      Oeu055350.2  5 KQKWTSEEEEALRAGVAKHGAGKWKNIQKDPEfnhllFSRSNIDLKDKWRNL 56
                     79*******************************9*9989***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MGNRKQKWTS EEEEALRAGV AKHGAGKWKN IQKDPEFNHL LFSRSNIDLK DKWRNLSVAN  60
GLGSRDKSKT PKAKASAADT PTILLPNPNT PISITPESQN TSADVVMEDS LRPLPEGNNA  120
SRDVGIWLYA PPNNDMGCWN GKNYDWIAID MQLDVETFFL ILEIWSKQVF RYREYNAMIY  180
EALLTLKEPN GSDSSTIANF IEQRNELPQN FKRLLSCRLR RLVQQDKLEK VQNCFRIKTD  240
VVLDMKTPTT KQNSLPRQAQ SIGYLGDTVE DAAVSAAYRI AEAENKSFVA AEAVKEAERV  300
SRMAEEMDSL LQFAADIFDQ SSGGEILLIA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.13e-34MYB_related family protein