PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu055177.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 429aa MW: 45863.8 Da PI: 6.983

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu055177.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	65.5	7.3e-21	99	138	5	44
WRC 5 grCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 rC+RtDGKkWRCsr+v++ +k+CErHl+++r rsrk++e Oeu055177.1 99 ERCKRTDGKKWRCSRDVVPHHKYCERHLQKSRPRSRKPVE 138 6************************************987 PP
2	QLQ	42.3	2.3e-15	50	82	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ +L +Q+++yKy++a++PvP++Ll++ Oeu055177.1 50 PFTSAQRKELDRQAMIYKYMMASVPVPADLLFP 82 8*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MENGVKVGGG RCSVVAKNLQ PFNLFSPSDT RSTAFRSTGE NGMAASGGFP FTSAQRKELD 60 RQAMIYKYMM ASVPVPADLL FPTASNPSIS LTGGDPHLER CKRTDGKKWR CSRDVVPHHK 120 YCERHLQKSR PRSRKPVELK NNGNNKKSPL FYNPKTVMST ISSSSSLKSE RGTALMERGM 180 DAGQQWQHLV DASVGFGDEG SIYSSIASVF HRDYVQQQPL NMFSYANFPA SEDVFKCSSG 240 GESNVGAFFN PDLVFSDKQP QNETSRGYID AWSNDYFNNN ENGNFESSAQ GNLSACSLDL 300 SMAVAAGNVL DEEMRKNQVD CGVDDSDGHS RLLSPVSWTR FAQGGPLAEA LRPGSVAGGG 360 GGGGGGGGSN PASPYDSIST PATNVSSPSG VLHWSLFSQS DISVCNSPTT LAAAPTATLE 420 GFAFQHLN*

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MENGVKVGGG RCSVVAKNLQ PFNLFSPSDT RSTAFRSTGE NGMAASGGFP FTSAQRKELD  60
RQAMIYKYMM ASVPVPADLL FPTASNPSIS LTGGDPHLER CKRTDGKKWR CSRDVVPHHK  120
YCERHLQKSR PRSRKPVELK NNGNNKKSPL FYNPKTVMST ISSSSSLKSE RGTALMERGM  180
DAGQQWQHLV DASVGFGDEG SIYSSIASVF HRDYVQQQPL NMFSYANFPA SEDVFKCSSG  240
GESNVGAFFN PDLVFSDKQP QNETSRGYID AWSNDYFNNN ENGNFESSAQ GNLSACSLDL  300
SMAVAAGNVL DEEMRKNQVD CGVDDSDGHS RLLSPVSWTR FAQGGPLAEA LRPGSVAGGG  360
GGGGGGGGSN PASPYDSIST PATNVSSPSG VLHWSLFSQS DISVCNSPTT LAAAPTATLE  420
GFAFQHLN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	8e-33	GRF family protein