PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu055123.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 315aa MW: 35035.5 Da PI: 6.7889

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu055123.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.4	3e-14	114	165	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ Oeu055123.1 114 QRMTHIAVERNRRRQMNDYLAMLRSLMPPS---YAQRGDQASIVGGAINFVKELE 165 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MTLEAVVFQQ DPFSYANWKD YSNRGDYGFD LGIQEDKPNA EKISNGYWDS PPSSIAQSVK 60 DCEAHNSSSP EICAGEGIFS GGGYSPMVAP AVATSRRKRR RTKSCKNQEE MENQRMTHIA 120 VERNRRRQMN DYLAMLRSLM PPSYAQRGDQ ASIVGGAINF VKELEQLLQS LEANNVAKKQ 180 HYTSTHSHLF SNFFTFPQYS TCPTRHGNST AGSSVNDMVE RRSTVADIEV TMVESHANIK 240 ILSKKMPKQL LKIVTGFQSM SLTVLHLNIT TVDQLVLYSI SVKVEDDCQL STVNEIASAV 300 HDMVGMIQEE AMSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	101	RKRRR
2	97	102	RKRRRT
3	115	126	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	5e-81	bHLH family protein