PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055077.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 28140.3 Da    PI: 8.6902
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055077.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.22.8e-30959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krienk+nrqvtfskRr+g+lKKA+ELSv+Cdaeva+iifs++gkl eys+
  Oeu055077.1  9 KRIENKINRQVTFSKRRTGLLKKAHELSVMCDAEVALIIFSNKGKLIEYST 59
                 79***********************************************96 PP
2K-box99.45.1e-338917415100
        K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                  ++++ e++kLk++ie LqreqRh++Ge+L+sLs ++Lq+LeqqL  +lk+iRs+Kn+ll+e+i+elq+kek+lqe+n +L k+++e
  Oeu055077.1  89 ANWTLEYNKLKARIELLQREQRHYMGEELHSLSQRDLQNLEQQLAIALKNIRSRKNQLLYESISELQRKEKALQEQNYMLAKQIKE 174
                  69*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGKVQLKR IENKINRQVT FSKRRTGLLK KAHELSVMCD AEVALIIFSN KGKLIEYSTD  60
SCMDRILERY ERNSFAEKQL VLNDPVSPAN WTLEYNKLKA RIELLQREQR HYMGEELHSL  120
SQRDLQNLEQ QLAIALKNIR SRKNQLLYES ISELQRKEKA LQEQNYMLAK QIKEKEKEMV  180
QQPHWDQQNH GNNMPTFLMA SQLPCLNING AYEGVATEDG RINGLDLNMD SLYSCHLGCF  240
PA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-103MIKC_MADS family protein