PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055051.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family AP2
Protein Properties Length: 467aa    MW: 50996.6 Da    PI: 6.6359
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055051.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-17157206155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Oeu055051.1 157 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 206
                  78*******************......55************************997 PP
2AP238.82.3e-12249296152
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                  s+y+GV+ +k  grW+A+   +     +k+ +lg f+++ eAa+a+++a+ k
  Oeu055051.1 249 SKYRGVTLHK-CGRWEARMGQY--L-GKKYTYLGLFDSEVEAARAYDEAAIK 296
                  89********.7******5552..1.25**********99*********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MLDLNIEAVS VDSSKWEDET DYHRKMGITP IIAVAEGDSL TSTTTSATNN AVEADEQDTN  60
SSTRRNSLST LNFSILKTNI IEISDDQNND DKKSSSELQL FPTSANDAAS PSAASMAKFW  120
LNLSVPEVPG ELGNHKALRQ QPPAVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK  180
QVYLGGFDTA LAAARAYDRA AIKFRGVDAD INFNISDYDV DMEQIKNLTK EEFIHTLRRQ  240
STGFARGSSK YRGVTLHKCG RWEARMGQYL GKKYTYLGLF DSEVEAARAY DEAAIKSSGG  300
DAVTNFEPGI YEKEINMAAG GGVSGNSLDL NLGISCSSVG VQGNENTRNV HFQYGSCELR  360
DGKKTKGESS SNAHDLATAP KYAPLWTGER ATGMNTEANA LPVFSNWPWK MQNIGVITPV  420
PLLSSAASSG FSSVTIPPSN SVESSNIPTT ISCYTFQRPP TTLDYK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.13e-92AP2 family protein