PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu054943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 155aa MW: 17868.2 Da PI: 9.2055 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 88.9 | 4.2e-28 | 63 | 121 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++W+KYG+K++k+s++pr+Y++C gC+vkk+ver++edp++v++tYeg H he Oeu054943.1 63 MDDGFKWKKYGKKMIKNSPNPRNYFKCQRDGCNVKKRVERDREDPRYVITTYEGVHYHE 121 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MDNGSEEDIF VENTIPPAEN VVNESSNPSP VARNMVHRRR EKKYKSQSEF KFALRTKSNI 60 EIMDDGFKWK KYGKKMIKNS PNPRNYFKCQ RDGCNVKKRV ERDREDPRYV ITTYEGVHYH 120 ESPNCVVCCN NQLPTHGLTL HQSSSLSFSP SPIL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 39 | 78 | RREKKYKSQSEFKFALRTKSNIEIMDDGFKWKKYGKKMIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 5e-37 | WRKY family protein |