PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu054858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 338aa MW: 38079.4 Da PI: 8.7552 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.9 | 2.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+ +++++G g+Wkt +++ g+ R++k+c++rw +yl Oeu054858.1 14 KGTWTAEEDQKLLAYIEEHGYGSWKTLPARAGLQRCGKSCRLRWANYL 61 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++ +++++++lG++ W+ Ia +++ +Rt++++k++w+++ Oeu054858.1 67 RGKFSLQEEQTIIQLHALLGNR-WSVIATHLP-KRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MGRSPCCEKV GLKKGTWTAE EDQKLLAYIE EHGYGSWKTL PARAGLQRCG KSCRLRWANY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS VIATHLPKRT DNEIKNYWNT HVKKKLTKMG 120 IDPVTHKLKI HALCTSQSKY TANLSHMAQW ESARLEAEAR FIHESKLVSK PYHSQSQVQL 180 LPKATAPLPL APPLPSRPPC LDILSVWTGE WTKSAKDISP IFNDFSPTLN FSSKNKFNTI 240 PTTIGHTDNS SIMPIGDVEN SLHMINGRIM DPINDSIYIT DALNVPSFVE SFTDLLPNMD 300 GITDNDVGSY DGRSEENKNY WNNELNSMTL PMGARVF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 1e-96 | MYB family protein |