PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu054698.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 400aa MW: 43215.8 Da PI: 8.2426

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu054698.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7.1e-05	164	186	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L++H+ H Oeu054698.1 164 ACSECGEVFPKIDSLEHHQAInH 186 6******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MAVFSFPPEP AKKQLSKRKN KQRPSSSSWD QIKNLLTCKQ IQDSKIHDPS KNNSATLLGS 60 SCSSICPSGD VVHGNTRVCH RSDNSLGQET RLLSKKSSNW SSSSSSSSTS ISSSVRSSSG 120 GGGGSTYTAG SSKGMHFSKL SGCYECHAIV DHTRYPFPRT IICACSECGE VFPKIDSLEH 180 HQAINHAVSE MGQDDSSRNI VEIIFKSSWL KKDSAICNIE RILKVHNTQL TIQQFEEYRD 240 AVKICATSNA KKNPRCAADG NELLRFHCAT LVCSLGACGS TSLCGSFPSC GVCTIIRHGF 300 QENKVSGVHT TASSGRAHDC LDNGDVQRAM LVCRVIAGRV KQVAHSATFE EDGVGMSHAH 360 SYDSLAECAG IFSKLEELYV FNPRAILPCF VVIYKALES*

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MAVFSFPPEP AKKQLSKRKN KQRPSSSSWD QIKNLLTCKQ IQDSKIHDPS KNNSATLLGS  60
SCSSICPSGD VVHGNTRVCH RSDNSLGQET RLLSKKSSNW SSSSSSSSTS ISSSVRSSSG  120
GGGGSTYTAG SSKGMHFSKL SGCYECHAIV DHTRYPFPRT IICACSECGE VFPKIDSLEH  180
HQAINHAVSE MGQDDSSRNI VEIIFKSSWL KKDSAICNIE RILKVHNTQL TIQQFEEYRD  240
AVKICATSNA KKNPRCAADG NELLRFHCAT LVCSLGACGS TSLCGSFPSC GVCTIIRHGF  300
QENKVSGVHT TASSGRAHDC LDNGDVQRAM LVCRVIAGRV KQVAHSATFE EDGVGMSHAH  360
SYDSLAECAG IFSKLEELYV FNPRAILPCF VVIYKALES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-142	C2H2 family protein