PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054619.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 166aa    MW: 18096.2 Da    PI: 7.0128
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054619.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260134.93e-4210108199
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrrkC ++C++a yfp e+p kfanvhk+FGasnv+kll+++p+++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el++++
  Oeu054619.1  10 PCAACKFLRRKCLPSCTFAAYFPPEEPTKFANVHKIFGASNVSKLLNEIPPNQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLHLQKELDATN 107
                  7*********************************************************************************************9987 PP

       DUF260  99 e 99 
                  +
  Oeu054619.1 108 A 108
                  6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MASSSYSNPP CAACKFLRRK CLPSCTFAAY FPPEEPTKFA NVHKIFGASN VSKLLNEIPP  60
NQREDAVNSL AYEAEARLKD PVYGCVGAIS VLQRQVLHLQ KELDATNADL MLYANNDVSH  120
SHPVQSNSTF SRTNAQYNGG ESNPGLLHPY ASPWNNDSSN DSKSM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.12e-67LBD family protein