PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu054593.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 123aa MW: 13325 Da PI: 7.7706 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 27.4 | 9.6e-09 | 1 | 34 | 67 | 100 |
DUF260 67 arardPvyGavgvilklqqqleqlkaelallkee 100 +r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+e Oeu054593.1 1 MRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSE 34 699**************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MRLRDPVYGC VGVISLLQHQ LRQLQMDLSC AKSELSKYQN LGITGHGLIA AAATATHHHQ 60 QNFGINLIGG GVGSRDHPFH HQFFPSNQQQ VIRSFDGENG YDASSLLAMN VSASIGHLSQ 120 FQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 1e-19 | LBD family protein |