PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054229.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 244aa    MW: 26702.9 Da    PI: 6.7421
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054229.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002689111123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C + F ++  L  H++ H
  Oeu054229.1  89 FSCNYCRRKFYSSQALGGHQNAH 111
                  89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MKSLNFNLES EDESEVSSQV ASNVSIQEIP PGHSKETNAT LSGLTDPISL QNDSMPITLD  60
LTLGFNSSDA ELNGMGQTSG HPPVVSRVFS CNYCRRKFYS SQALGGHQNA HKRERTLAKR  120
AMRMGMLSDR YASLASLPLH GSAFRSLGIE AHASMHQQVV QQERPIHGVR GGARFNHGYY  180
GLPLYMEDDE VEMYWPGSFR QIEGHNGNNL GIHSGQNSNI NIVAMVPPPP RTDSSLPDLN  240
LKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-52C2H2 family protein