PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053896.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 757aa    MW: 85280.7 Da    PI: 5.2839
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053896.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.43.9e-1123827531373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL++cA+ v+++d ++ +  L++++++asp+gd+ qRla +f+ +L+ar +++++++y++l++++ +    +e+l+a++++  ++P+ ++s + a
  Oeu053896.1 382 LRTLLISCAQSVAADDRRAESVQLQQIRQHASPTGDAYQRLAYVFAYGLEARFSGTGTQIYASLASKNIT---AVEKLKAYQVYLSACPFKQISIIFA 476
                  6789************************************************************999999...9************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N++I++a+++++++Hi+Df+i +G+QWp+L+q L+ Rp+gpp+lRiTg++ p++g   +e++eetg rLak++e++gvpfe+++++++++e++++e+L
  Oeu053896.1 477 NKMIMKAASEATTLHIVDFGILYGFQWPSLIQHLSRRPGGPPKLRITGIEFPQPGfrPAERVEETGCRLAKYCERFGVPFEYQAIATQNWETIKIEDL 574
                  ******************************************************9******************************999********** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  ++ +gE+laVn+ ++  rllde+v+++ +rd+vL+l+++++P+++v++    +++++ F +rf eal yysalfd+l+++lpr++ +r++ E+e+ gr
  Oeu053896.1 575 KIAHGEVLAVNCLYRFGRLLDETVEVDCPRDAVLNLIRKMNPNIFVHAVGSGSYSAPFFITRFREALFYYSALFDMLDTTLPRDDPHRMNFEQEFYGR 672
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  ei nv+acega r+er et ++W+ r ++aGFkp+pl+++ + + +  ++  + + +  +e+ +++++gWk+r ++  S+W
  Oeu053896.1 673 EIINVIACEGAGRVERPETHKQWQIRTMRAGFKPLPLNHEFMRKLRNKVKAGYHKDFLFDEDGNWMLQGWKGRIIYGSSCW 753
                  **************************************************999888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MDPGFSEMHN MINGFGSDDE TLLHGFEQSH GQVNGYKYDV SLDPNIADIP FLTFSQGLEN  60
FTPSFSGSYE VESPDDQDSD PVLKYLNQIL IEENMDDKPS MFHDPLALQA AEKSLYEVLG  120
QKYPPSPHQK SDYFNCSTES RDTFFGSSSE NTNSSTNGTN SIDPQWIVDP GEFHSSVEQS  180
QLLDTASKSA TKTSSQLSFG SVNSFNDNIN IQMSSFENTS LIPNIFSDSE SILQFKRGME  240
EASKFLPPSN QLIIDLDKYT LPPKSDETTH TVTVKVEKDE IDHLTNGSRG RKHHHPEDGD  300
SENVERSSKQ SAVHVEDVEL PEMFDKVLLF ADVKCEPMHC NVDTKLPGGE EKNLLQTVLP  360
NGSNGGRTRA KKHENNSEVV DLRTLLISCA QSVAADDRRA ESVQLQQIRQ HASPTGDAYQ  420
RLAYVFAYGL EARFSGTGTQ IYASLASKNI TAVEKLKAYQ VYLSACPFKQ ISIIFANKMI  480
MKAASEATTL HIVDFGILYG FQWPSLIQHL SRRPGGPPKL RITGIEFPQP GFRPAERVEE  540
TGCRLAKYCE RFGVPFEYQA IATQNWETIK IEDLKIAHGE VLAVNCLYRF GRLLDETVEV  600
DCPRDAVLNL IRKMNPNIFV HAVGSGSYSA PFFITRFREA LFYYSALFDM LDTTLPRDDP  660
HRMNFEQEFY GREIINVIAC EGAGRVERPE THKQWQIRTM RAGFKPLPLN HEFMRKLRNK  720
VKAGYHKDFL FDEDGNWMLQ GWKGRIIYGS SCWVPA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein