PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053808.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 264aa    MW: 29161.1 Da    PI: 9.7434
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053808.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH47.13.9e-15182206226
                  -S---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                  ktelC+ +++tGtC+yGd C+FaHg
  Oeu053808.1 182 KTELCNKWQQTGTCPYGDHCQFAHG 206
                  8***********************8 PP

2zf-CCCH18.14.8e-06219244126
                  --S---SGGGGTS.--TTTTT-SS-SS CS
      zf-CCCH   1 yktelCrffartG.tCkyGdrCkFaHg 26 
                  ykte Cr  +  G +C+yG rC+F H+
  Oeu053808.1 219 YKTEVCRMVLN-GdHCPYGHRCHFRHS 244
                  9******9999.55**********998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MIEQHHTVFS HLQKTAKQVQ SLRQDNVNLK MANIDLNHRL KLLVNSTSSF GLSGLVPGSS  60
SGWDPIVDGL GKMSLGGEDG PGEKEEGENE VTAAFSQGHS TSPKSVVDLG RVGGSGEERI  120
SLPKSISVRS SGYLKTARAV GMSNGGRVKA QDRTKTQRVY VSGGKKVEEA LELEVYNQGM  180
HKTELCNKWQ QTGTCPYGDH CQFAHGIKEL RPVLRHPRYK TEVCRMVLNG DHCPYGHRCH  240
FRHSLTDQEK LMRSMNTRLL KPR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.12e-61C3H family protein