PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu053685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 281aa MW: 31720.5 Da PI: 7.1086 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.9 | 4.7e-13 | 14 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg......kgRtlkqcksrwqkyl 48 +g WT+eEd +l+++ ++ G++ +W+t +++ g + R++k+c++rw++yl Oeu053685.1 14 KGHWTPEEDWKLKEYMEKNGTEgNWTTLPQKAGmgifhfELRCGKSCRLRWLNYL 68 789************************************99************97 PP | |||||||
2 | Myb_DNA-binding | 34.3 | 5.7e-11 | 76 | 117 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T Ed ++ +++ G++ W+ Ia ++ gRt++++k++w++ Oeu053685.1 76 EFTDNEDRIICSLFASIGSR-WSIIAGQLP-GRTDNDIKNYWNT 117 699*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MGRTPCCVKA NVKKGHWTPE EDWKLKEYME KNGTEGNWTT LPQKAGMGIF HFELRCGKSC 60 RLRWLNYLRP NIKHREFTDN EDRIICSLFA SIGSRWSIIA GQLPGRTDND IKNYWNTKLK 120 KKFLLELVPA MLQKNHPQAI TYSLHHNSSV ESPHSASTAL QPQDGYVGVG SMHNNQINDS 180 RLIIFGSGEA SCSSSDGSCT TNHIISHGQE VVEYDHGFSS HFSSGIDENT KLKLAKNGDS 240 LNGYVCENPT NICFYEDSLD YSIEVMKQLD YTNNFSNNWI * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 4e-63 | MYB family protein |