PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu053654.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 613aa MW: 68002.5 Da PI: 7.3845

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu053654.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.6	6.2e-13	245	313	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng...........kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g k+ k+ lg ++ +e+Aa+a++ a++k++g Oeu053654.1 245 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtrkgrqdyelKTcKNLILGGYDMEEKAARAYDLAALKYWG 313 78*****************988884446668889997447***********************98 PP
2	AP2	45.8	1.5e-14	358	407	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Oeu053654.1 358 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 407 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MKSMNDNSNG SNDNNWLGFT LSPMNMEGSS SDPHPHHQFN HNTDAPPATT AVPSSNFYLS 60 PLHLNTSTIC YGVGEMGGFH SPLSVMPLKS DGSLCIMEAF SRSHAQAMAP NSSPKLEDFL 120 GGATMASHGE TMALSLDSIF YNQESIRQQH NHQYYSELQY NEQQVNGCMV EDRGASGSKT 180 CGDLQSLSLS MSPNSQSSCV TASRQISPTE SHCIALGTKK RGSEKVAQKQ TVHRKSIDTF 240 GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQD YELKTCKNLI LGGYDMEEKA 300 ARAYDLAALK YWGPTTHINF SLENYRQELE GMKNMSRQEY VAHLRRKSSG FSRGASMYRG 360 VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVNA VTNFDISRYD 420 VEKIIASSTL PTGELARRNK EREPQPEAIE YSTLAQKPEG FARLENVPDW KMVLYQSSSH 480 QQNDSLELVN EKRMHSGNYQ NPSFSVGLQD LIGIDASNIN EPVTEEPINP GTQHFSNPSS 540 LVTSLSSSRE ASPDKTGASI LFAKPTTLTT KYDGPSASAS TYDNTWMHAT TQLRPLPLSI 600 AQLPAFAAWN DT*

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MKSMNDNSNG SNDNNWLGFT LSPMNMEGSS SDPHPHHQFN HNTDAPPATT AVPSSNFYLS  60
PLHLNTSTIC YGVGEMGGFH SPLSVMPLKS DGSLCIMEAF SRSHAQAMAP NSSPKLEDFL  120
GGATMASHGE TMALSLDSIF YNQESIRQQH NHQYYSELQY NEQQVNGCMV EDRGASGSKT  180
CGDLQSLSLS MSPNSQSSCV TASRQISPTE SHCIALGTKK RGSEKVAQKQ TVHRKSIDTF  240
GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQD YELKTCKNLI LGGYDMEEKA  300
ARAYDLAALK YWGPTTHINF SLENYRQELE GMKNMSRQEY VAHLRRKSSG FSRGASMYRG  360
VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVNA VTNFDISRYD  420
VEKIIASSTL PTGELARRNK EREPQPEAIE YSTLAQKPEG FARLENVPDW KMVLYQSSSH  480
QQNDSLELVN EKRMHSGNYQ NPSFSVGLQD LIGIDASNIN EPVTEEPINP GTQHFSNPSS  540
LVTSLSSSRE ASPDKTGASI LFAKPTTLTT KYDGPSASAS TYDNTWMHAT TQLRPLPLSI  600
AQLPAFAAWN DT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-148	AP2 family protein