PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu053058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | G2-like | ||||||||
Protein Properties | Length: 241aa MW: 27416.3 Da PI: 9.5145 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.7 | 1.1e-27 | 2 | 54 | 3 | 56 |
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G ++A+P++ile+mkv+gLt+++++SHLQkYR++ Oeu053058.1 2 QVDWTPELHKKFVQAVEQL-GVDQAIPSRILEIMKVEGLTRHNIASHLQKYRMH 54 579****************.********************************97 PP | |||||||
2 | Myb_DNA-binding | 43.8 | 6.1e-14 | 4 | 52 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ Oeu053058.1 4 DWTPELHKKFVQAVEQLGVDqaIPSRILEIMKvEGLTRHNIASHLQKYR 52 5***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MQVDWTPELH KKFVQAVEQL GVDQAIPSRI LEIMKVEGLT RHNIASHLQK YRMHRRHILP 60 KADDRRWPHP RDSAQRSHYL HKPVMAFPQF HSSHVHPAGH AYPAWMPPGS YPSPVQMWGS 120 PYYSGWQPTE SWHWKPYSGM HADAWGCPVM PSPQGSCLPF HQNAAGFHNA NEMHNRVGMP 180 SFDAYPAEEI IDKIVKEAID KPWLPLPLGL KPPSTETVLN ELSKKGINSI PPRINGSHLR 240 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 5e-59 | ARR-B family protein |