PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu053004.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 512aa MW: 53412.2 Da PI: 8.1776

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu053004.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu053004.1 63 FVCEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	14.5	0.0001	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H++ + Oeu053004.1 139 WKCEKCSKKYAVQSDWKAHLKIC 161 58******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MLADLDNSST VNDFTASGDS SSGNQIAPSK PSVKKKRNLP GMPDPDAEVI ALSPKTLLAT 60 NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LKQRSSKEPK KRVYVCPELS CVHHDPSRAL 120 GDLTGIKKHF CRKHGEKKWK CEKCSKKYAV QSDWKAHLKI CGTKEYKCDC GTLFSRRDSF 180 ITHRAFCDAL AEESAKRRTA IAPPCADEEP NIQAVESSPS LPPPAVAPPP QAPAPPVPPS 240 TGVVSSVLTV QNPELVESSN PSPTTPQILE ESLTPASTVT SLTTSFSSAS SSSSSGSTSS 300 NAFASLFASS TASGSLQSQT TGFTNLFQVM ARPEQAANVA PSSSAEPVSL CLATNHGSSI 360 FGTAGQERRQ YAPALQPAAM SATALLQKAA EMGAAASNAS LLRGLGFVSS SSPCSGLQEW 420 SARQIEPEGP PLAAGLGLGL TCDGGSSLKE LMLGTPSAFG PKHTTLDLLG LGMAASGGQT 480 GGLSALMTSI NNGLDVAAAF GGGEFGGKHM E*

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MLADLDNSST VNDFTASGDS SSGNQIAPSK PSVKKKRNLP GMPDPDAEVI ALSPKTLLAT  60
NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LKQRSSKEPK KRVYVCPELS CVHHDPSRAL  120
GDLTGIKKHF CRKHGEKKWK CEKCSKKYAV QSDWKAHLKI CGTKEYKCDC GTLFSRRDSF  180
ITHRAFCDAL AEESAKRRTA IAPPCADEEP NIQAVESSPS LPPPAVAPPP QAPAPPVPPS  240
TGVVSSVLTV QNPELVESSN PSPTTPQILE ESLTPASTVT SLTTSFSSAS SSSSSGSTSS  300
NAFASLFASS TASGSLQSQT TGFTNLFQVM ARPEQAANVA PSSSAEPVSL CLATNHGSSI  360
FGTAGQERRQ YAPALQPAAM SATALLQKAA EMGAAASNAS LLRGLGFVSS SSPCSGLQEW  420
SARQIEPEGP PLAAGLGLGL TCDGGSSLKE LMLGTPSAFG PKHTTLDLLG LGMAASGGQT  480
GGLSALMTSI NNGLDVAAAF GGGEFGGKHM E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-110	C2H2 family protein