PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052826.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 338aa    MW: 37271.4 Da    PI: 9.2025
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052826.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-07243283954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r+RR+ri +++  L+ l+P        K++ a++L +A +Y+k L
  Oeu052826.1 243 ARQRRERISERIRVLQGLVPGG-----SKMDTASMLDEAANYLKFL 283
                  69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MSSSAEVNRP NSTMINQQNC LSAEFGLENR QVFGGLQEIK AGISNPGSLE SIDCLLSTTN  60
SKPDTSVEDD GISMLFSDSK DLWNPNSSAL IKSDGTSAST VKHYTNRTVS RASTDEYVIQ  120
SSFSGANNKP NPNKRSRSES QLIKPNGLQY QNLDFHQSNH SSNPQKSKKP RSDYYSNSSN  180
INFQQPTLSA SSMDEPDSEA IAQMKEMIYQ AAAFRPVNFG VEAVEKPKRK NVKISTDPQT  240
VAARQRRERI SERIRVLQGL VPGGSKMDTA SMLDEAANYL KFLRSQVKAL EGLGQKIDTT  300
VNFSTITNPV FYTFNPPFAM QNQLSLQNPN PIYQSKS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244249RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.13e-69bHLH family protein