PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052559.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 274aa    MW: 31005.9 Da    PI: 5.1749
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052559.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.21e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l  +v ++G  +W++ +++ g+ R++k+c++rw +yl
      Oeu052559.1 14 KGAWSKEEDDKLRAYVLRYGHWNWRLLPKYAGLARCGKSCRLRWVNYL 61
                     79******************99************************97 PP
2Myb_DNA-binding55.71.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE++l++++++qlG++ W++Ia+ +  gRt++++k++w++++
      Oeu052559.1  67 RGNFTKEEEDLIAELHNQLGNK-WSAIAANLT-GRTDNEIKNYWHTHM 112
                      89********************.********9.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVRPCFFDNN GMKKGAWSKE EDDKLRAYVL RYGHWNWRLL PKYAGLARCG KSCRLRWVNY  60
LKPGLKRGNF TKEEEDLIAE LHNQLGNKWS AIAANLTGRT DNEIKNYWHT HMKRCNKRKA  120
AAAQVTVPQT IENTPSQIQT PKESEKLMLL PNTANWIACD TTSFDSIAVP QDNSLPETFP  180
PITYNGQTNM FPAVPDPFEL SSELNFSELS CPDFSMLNDL CWVGDDSVNS SDSGFQGNFG  240
IEPSETNYLL PVEEAGPVSP HISYFDDFMV NMF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.22e-51MYB family protein