PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu052419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 214aa MW: 24767.1 Da PI: 10.6642 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.5 | 1e-15 | 73 | 132 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k +gr++A+++d s+n k+ k+++lg f+ +e Aa+a++ a++k++g Oeu052419.1 73 SRFRGVSKHKLTGRYEAHLWDkLSWNVtqkKKgKQVYLGAFDEEEAAARAYDLAALKYWG 132 789******************888855555447*************************98 PP | |||||||
2 | AP2 | 27 | 1.1e-08 | 175 | 207 | 1 | 36 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 s+y+GV +++ +grW+A+I ++ +k+ +lg++ Oeu052419.1 175 SKYRGVARHHHNGRWEARIGRVYG---NKYLYLGTY 207 89****99***********99654...4*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MEQLNMALTM IKRDENARRR QMRNIDSDLS PEPRNIKRRR HETASTAAAI SCEGRLIKQE 60 VDPTAPTTVK RSSRFRGVSK HKLTGRYEAH LWDKLSWNVT QKKKGKQVYL GAFDEEEAAA 120 RAYDLAALKY WGTSTFTNFP ISDYEKEIEI MQTVTKEEYL ASLRRKSSGF SRGISKYRGV 180 ARHHHNGRWE ARIGRVYGNK YLYLGTYSKS RQK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 40 | RRRQMRNIDSDLSPEPRNIKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-68 | AP2 family protein |