PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052323.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 430aa MW: 47600.7 Da PI: 5.6244

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052323.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.9	1.1e-05	320	358	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++ L++l+ + +K + a++L +A+eYIk+L+ Oeu052323.1 320 RKEKMGDRVTALQQLVSPF-----GKTDTASVLSEAIEYIKHLH 358 5567777777888888887.....8*****************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MADEFQLGST GNWCDTSRNR FDTTSSSQSS ISATLSNNKK LTFEWPTEMS EINPRSSMDS 60 SSVFPFSKLQ ERDANLQVMG LGLSSQGMDW NHSLLSEKAM LQEDANFQQE AGGASSQDQR 120 TGQKIYSDCA ENSSVMNDFK QINRGFSLDQ PEYSSQVSSN DTGGTISQGL TTSFQMESAA 180 YGLLLSDNQP HQSTYENQAM NYPGPYPTIY GATNGELFPS WSKIFPFLRA SAPKQPPSGH 240 LHFTNNTPFW NASAAAIDDV RPSFFPSLQP QLPTPPFHEK PKITMETRDV GMITKKNTTE 300 TSNKRSRSET PSPLPALKVR KEKMGDRVTA LQQLVSPFGK TDTASVLSEA IEYIKHLHDQ 360 VNVLSTPYLK SGVPLQHQQN SDKFNDPDQW QAQDLKSRGL CLVPVSSTIP VTHETTTDFW 420 NPTFGGTFR*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MADEFQLGST GNWCDTSRNR FDTTSSSQSS ISATLSNNKK LTFEWPTEMS EINPRSSMDS  60
SSVFPFSKLQ ERDANLQVMG LGLSSQGMDW NHSLLSEKAM LQEDANFQQE AGGASSQDQR  120
TGQKIYSDCA ENSSVMNDFK QINRGFSLDQ PEYSSQVSSN DTGGTISQGL TTSFQMESAA  180
YGLLLSDNQP HQSTYENQAM NYPGPYPTIY GATNGELFPS WSKIFPFLRA SAPKQPPSGH  240
LHFTNNTPFW NASAAAIDDV RPSFFPSLQP QLPTPPFHEK PKITMETRDV GMITKKNTTE  300
TSNKRSRSET PSPLPALKVR KEKMGDRVTA LQQLVSPFGK TDTASVLSEA IEYIKHLHDQ  360
VNVLSTPYLK SGVPLQHQQN SDKFNDPDQW QAQDLKSRGL CLVPVSSTIP VTHETTTDFW  420
NPTFGGTFR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	1e-67	bHLH family protein