PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052052.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 533aa MW: 59080.9 Da PI: 6.1982

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052052.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.1	6.1e-15	167	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Oeu052052.1 167 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 226 57*****************666664477446***********************98 PP
2	AP2	48	3.1e-15	271	320	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Oeu052052.1 271 YRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDVAAIKFRG 320 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MNSNNWLSFP LSPTHSSLPP HLQTAQSHQF SLGLVNDNID TPLHNQEWNL INSEGNNEVP 60 KVADFLGVGK SDNHAELVPY SAIQSSDSDY LFSNNSLVSV QHSMAVASDN YDLQENPCNM 120 QSLTLSMGTG KGLTSENSAT VSADNSNTSI VEAAPRRTLD TFGQRTSIYR GVTRHRWTGR 180 YEAHLWDNSC RREGQSRKGR QVYLGGYDKE EKAARAYDLA ALKYWGTSTT TNFPINNYDK 240 ELEEMKHMTR QEFVASIRRK SSGFSRGASM YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT 300 FSTEEEAAEA YDVAAIKFRG LNAVTNFDMN RYDVKAILDS NSLPIGGGAA KRLKEAQAVE 360 SSRKREEMIS LGSNYQYGSS SSIPLAYPLM QQPFDHTQPL LTLQNQDLSP YNTNQDSHYQ 420 NYIHKQLQLH QQSSSYNPQF YNNSLQNNPI LLHGLMNTGS SSVMDSNCSS IGSYGGGYLG 480 MASNSIPDNG GGSAEELALM KVDYDMPSTN YAGWSGDSVQ GSNPDDFTMW ND*

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MNSNNWLSFP LSPTHSSLPP HLQTAQSHQF SLGLVNDNID TPLHNQEWNL INSEGNNEVP  60
KVADFLGVGK SDNHAELVPY SAIQSSDSDY LFSNNSLVSV QHSMAVASDN YDLQENPCNM  120
QSLTLSMGTG KGLTSENSAT VSADNSNTSI VEAAPRRTLD TFGQRTSIYR GVTRHRWTGR  180
YEAHLWDNSC RREGQSRKGR QVYLGGYDKE EKAARAYDLA ALKYWGTSTT TNFPINNYDK  240
ELEEMKHMTR QEFVASIRRK SSGFSRGASM YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT  300
FSTEEEAAEA YDVAAIKFRG LNAVTNFDMN RYDVKAILDS NSLPIGGGAA KRLKEAQAVE  360
SSRKREEMIS LGSNYQYGSS SSIPLAYPLM QQPFDHTQPL LTLQNQDLSP YNTNQDSHYQ  420
NYIHKQLQLH QQSSSYNPQF YNNSLQNNPI LLHGLMNTGS SSVMDSNCSS IGSYGGGYLG  480
MASNSIPDNG GGSAEELALM KVDYDMPSTN YAGWSGDSVQ GSNPDDFTMW ND*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein