PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052045.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 327aa MW: 36846.2 Da PI: 7.2233

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052045.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.7e-05	165	184	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Oeu052045.1 165 FSCPLCYKTFNRYNNMQMHM 184 89*****************9 PP
2	zf-C2H2	14.7	9.1e-05	249	271	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Oeu052045.1 249 FMCRKCGKAFAVRGDWRTHEKNC 271 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MTDPYPNYLN GGWFNLRYPN NHLSSSTYPY HLNYSTSFNN VSWYQSSPPS PAIREALPLL 60 SLSPTKRSTD QEQGSSSCST AMEMDKNINE ESFMMDADDE TVTVDLNLGL PTPDAADLIS 120 GLSSSSSTNK DQEVTVANGY CTSPINKGQY WIPTPAQILI GPTQFSCPLC YKTFNRYNNM 180 QMHMWGHGSQ YRKGPESLRG IQPTAMLKLP CYCCAPDCRN NIDHPRAKPL KDFRTLQTHY 240 KRKHGIKAFM CRKCGKAFAV RGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIKAFGNGH 300 AAYGFDCFEE EDEPASDIEQ DNESSQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-133	C2H2 family protein