PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu051778.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 179aa MW: 20361.9 Da PI: 9.7981 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.6 | 1.1e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ v ifss+gk+ye + Oeu051778.1 9 KRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVFIFSSHGKFYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 62.3 | 1.8e-21 | 81 | 173 | 7 | 99 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ +++a l+ e++ Lk +i+ Lq+ +R + G + + ++l eL+ Le++Le + +iRs+K+++++++ie l++ke+ l+ +n+ L++k++ Oeu051778.1 81 EQPRDKQALDLKGEISLLKHKIDGLQKGLRFISGGGTGAMTLDELNDLEKHLEVCVYQIRSTKMDIMFQEIELLKNKERILKAANEHLQEKVK 173 445677888999******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MARGKIQMKR IENPVHRQVT FCKRRTGLLK KAKELSVLCD AEIGVFIFSS HGKFYELATK 60 GTMQGLIERY MKCNPLGAQT EQPRDKQALD LKGEISLLKH KIDGLQKGLR FISGGGTGAM 120 TLDELNDLEK HLEVCVYQIR STKMDIMFQE IELLKNKERI LKAANEHLQE KVKYDIII* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 9e-68 | MIKC_MADS family protein |