PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051415.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 104aa    MW: 11723.9 Da    PI: 8.6427
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051415.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.33.2e-26959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+ien  nrq+tf+kRr g+lKKA EL vLC+aev viifs+tgkl+e+ss
  Oeu051415.1  9 KKIENVNNRQITFTKRRIGLLKKADELAVLCEAEVTVIIFSNTGKLFEFSS 59
                 68***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MGRGKIEIKK IENVNNRQIT FTKRRIGLLK KADELAVLCE AEVTVIIFSN TGKLFEFSSS  60
EYALYAFQII PLGFFFGFLG WGLIDLMHLC SCYSLILCFI KST*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.12e-28MIKC_MADS family protein