PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu051266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 114aa MW: 12822.6 Da PI: 6.7124 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 24.8 | 2.8e-08 | 3 | 36 | 17 | 50 |
HHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 17 rngilKKAeELSvLCdaevaviifsstgklyeys 50 ++ i K +ELS C+++++ +i++++g++ +++ Oeu051266.1 3 KESIKKQTKELSEICNVKACAVIIGPDGTIETWP 36 67788999*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MQKESIKKQT KELSEICNVK ACAVIIGPDG TIETWPENRN DVRELIQAYK NRGPEKEQPQ 60 ELDGDNDKTK ETVSVVSGNP TKEEILRSID AKLAEVRKRI QILKANEMKK TES* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02235.1 | 2e-10 | M-type_MADS family protein |