PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051266.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 114aa    MW: 12822.6 Da    PI: 6.7124
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051266.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.82.8e-083361750
                 HHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF 17 rngilKKAeELSvLCdaevaviifsstgklyeys 50
                 ++ i K  +ELS  C+++++ +i++++g++ +++
  Oeu051266.1  3 KESIKKQTKELSEICNVKACAVIIGPDGTIETWP 36
                 67788999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MQKESIKKQT KELSEICNVK ACAVIIGPDG TIETWPENRN DVRELIQAYK NRGPEKEQPQ  60
ELDGDNDKTK ETVSVVSGNP TKEEILRSID AKLAEVRKRI QILKANEMKK TES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02235.12e-10M-type_MADS family protein