PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050868.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 174aa    MW: 18268.9 Da    PI: 7.695
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050868.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260971.9e-302102196
       DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                  +C++C+vlrr+C+++C+l+p++     p++q +++ +v k+FG+s ++ +++a+p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e
  Oeu050868.1   2 SCNGCRVLRRGCSEECILRPCLdwigsPDAQGNATFFVSKFFGRSDLMAFISAAPQNKRTALFQSLLFEACGRTVNPVNGAVGLLSTGNWHVCQAAVE 99 
                  6**********************************************************************************************999 PP

       DUF260  94 lal 96 
                  ++l
  Oeu050868.1 100 TVL 102
                  865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSCNGCRVLR RGCSEECILR PCLDWIGSPD AQGNATFFVS KFFGRSDLMA FISAAPQNKR  60
TALFQSLLFE ACGRTVNPVN GAVGLLSTGN WHVCQAAVET VLGGGTLQPI AMPPNTGDVS  120
EAFRMGGAWS NAKIGAGGST LMTDENAASF QSGISELLSG FGRKEPKLLN LFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.11e-60LBD family protein