PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050784.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 288aa    MW: 32262 Da    PI: 5.5127
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050784.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1171.1e-36101012102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++ +++isw+e+g++fvv+++ efak++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+++kell +i+
   Oeu050784.1  10 FLTKTYHLVDDRSSDDVISWNESGTTFVVWKTAEFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANENFKRDQKELLIEIR 97 
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
   Oeu050784.1  98 RRKT 101
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSQRSVPAPF LTKTYHLVDD RSSDDVISWN ESGTTFVVWK TAEFAKDLLP NYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANENFKRDQK ELLIEIRRRK TVPSQNPAGE KNVAADSRAL  120
PENSGDDLGS SSTSSPDSKN PGSLETQTSA QLADLSDENE KLKKNNHMLS SELAQTKKQC  180
DELIAFLTQC VKVAPEQINR IMNGSAPIID EAGPCSRGMS DGNTDIDDDE NVECLKLFGV  240
MVKKKRGRDE NPDFSEVHKK EMKRTVEVDA PWMKISASSG ENSKVYN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243263KKKRGRDENPDFSEVHKKEMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.14e-78HSF family protein