PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu050750.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 324aa MW: 36279.8 Da PI: 7.7125

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu050750.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	131.8	2.8e-41	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrrkC++dCv+apyfp ++p+kf nvh++FGasnv+k+l++l++++re+a++sl+yeA r+rdPvyG+vg+i l ++l+q++++l +k Oeu050750.1 7 SCAACKFLRRKCTQDCVFAPYFPPDNPQKFDNVHRVFGASNVSKILSELNPSQREAAANSLAYEAAYRLRDPVYGCVGLIYLLYHKLRQVQHDLYNTK 104 6********************************************************************************************99988 PP DUF260 99 ee 100 +e Oeu050750.1 105 NE 106 76 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MSSSNSSCAA CKFLRRKCTQ DCVFAPYFPP DNPQKFDNVH RVFGASNVSK ILSELNPSQR 60 EAAANSLAYE AAYRLRDPVY GCVGLIYLLY HKLRQVQHDL YNTKNELAQH IRPSDMLPNL 120 NHPGFMHQRP NIGASSYQVM PYNMQPMMGG PAVFPQWALV IRDSQQQPPP RPRPPPQQQQ 180 ILEAQQLAMP AAARKLDMFR NYEQQLHLQQ NDLVRFNSGF ETAGGTVTLT GLNQMIPATA 240 AAANMPLALA LGSNEGNPYG HHIQQQAAEQ SHSHHPQQLD LFPYELSIQQ QQQLNATPHH 300 QAQELQTSQP HSASREEGRS FDP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	4e-57	LBD family protein