PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050397.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 243aa    MW: 27107.2 Da    PI: 10.5223
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050397.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001982104123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C + F ++  L  H++ H
  Oeu050397.1  82 FSCNYCQRKFYSSQALGGHQNAH 104
                  89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MEASVQYHNV QTAQRRTKQM KEQDQNQANR RNINLVLDLS LSIKDIDQNS GPELNLLDKN  60
LSENPSNNDP SPQGNESGPP FFSCNYCQRK FYSSQALGGH QNAHKRERTI VKRGPRFGGA  120
ASRSRDRYLN MGFLPLHGSL NRSLGIHVHS TIHEPTYLAS STTYGQHGWS RKPLDQQPTI  180
RRLAAQNHHV GSSSNGGAAR FDTVQKFSLG VNGIGIHRWN STGPPMKTNQ EEQKKLDLSL  240
KL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.18e-38C2H2 family protein