PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050396.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 293aa    MW: 32701.3 Da    PI: 5.4589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050396.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-11150195555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er+RR+ + ++f  L  l+P +     kK++K +iL  A+ Y+k+Lq
  Oeu050396.1 150 HIIAERKRRELLSQRFVALSALVPGL-----KKVDKTSILGDAITYVKHLQ 195
                  899***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDNSIFEDQI DFDEELNALL KEDLSPGNNS SSSLTLIPSS SSMSSLGTSR GMEPPQVSFE  60
PPPEQQKLNN YNDYCVPNFD QGHSSTPIIL NFCNSNSPTR RHQQYNLSSL NPEEKAAVSE  120
ALRNPEEAIK TARKTKKNGR VRPRSQPYDH IIAERKRREL LSQRFVALSA LVPGLKKVDK  180
TSILGDAITY VKHLQECVKE FEEQATKHTV ESVVIVKKST LSVEDEGSSD ENNSSELPEI  240
EAKVCNNHVF LRIYCEKHKD GERIQLVADS SSTGSSFGSS TCNIERDSLY RF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-33bHLH family protein