PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu050185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 57aa MW: 6484.65 Da PI: 6.3623 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 29.9 | 7.3e-10 | 11 | 34 | 27 | 50 |
HHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 27 LSvLCdaevaviifsstgklyeys 50 LSvLCd++ +v+i++++gk+ +++ Oeu050185.1 11 LSVLCDVKDCVVILGPDGKIETWP 34 9**********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 57 aa Download sequence |
MELSVLCDVK LSVLCDVKDC VVILGPDGKI ETWPQNRIYV REMVDLYRKN CLNNNK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11250.1 | 6e-10 | M-type_MADS family protein |