PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu050108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 237aa MW: 26251.2 Da PI: 6.2782 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177 | 1.8e-55 | 65 | 160 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcq ekrktingdd+lwa+ tlGfedyv+plk+yl+kyre+eg+k Oeu050108.1 65 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQSEKRKTINGDDILWAIMTLGFEDYVNPLKLYLAKYREVEGDK 160 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MKREGDNIDD ERSAFGPNGT KRISQETICS KDANIATSSS NVNPNNVGAY GTSIGNGTNG 60 NNNNKEQDRF LPIANVGRIM KKVIPGNGKI SKDAKETVQE CVSEFISFVT GEASDKCQSE 120 KRKTINGDDI LWAIMTLGFE DYVNPLKLYL AKYREVEGDK LNVPKQQRVE QRLQQHEQQQ 180 KPNVPYNPST VYSSTNLICQ PPFVSTDPPF PLPISQNSIQ NSPLPQQEHI DSVGHW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G13570.1 | 3e-63 | NF-YB family protein |