PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu049940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB_related | ||||||||
Protein Properties | Length: 96aa MW: 10688 Da PI: 8.8668 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.8 | 1.4e-09 | 6 | 53 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT+ +l+ +a + + ++ +W + a+ +g g+t++++k+++ k+ Oeu049940.1 6 TWTAKQNKLFENALATYDKDspdRWQKMANAVGGGKTAEDVKLHYEKL 53 7********************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MASNSTWTAK QNKLFENALA TYDKDSPDRW QKMANAVGGG KTAEDVKLHY EKLVEDINHI 60 ESGQIPLPNY SSTGDTSKGN KIMAEEKRLK YLKLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 6e-36 | MYB_related family protein |