PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu049893.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 244aa MW: 26982.2 Da PI: 10.2906 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100 | 1.5e-31 | 167 | 224 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YYrC+s gCp++k+ver+ ++p+++++tYeg+Hnh+ Oeu049893.1 167 DNYSWRKYGQKPIKGSPYPRGYYRCSSVkGCPARKHVERALDEPNMLIVTYEGDHNHS 224 9*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MECKTVPDLA MSKFKKVISL MGRSRIGHAR FRRAPVAPPP PSLPPPPRPT SLSLLSNRVV 60 DQSEQCKEEP DNKIYCPKPI NRVPPCIDDA NQTSEKTVNI SYSPAISGAK PPSSSLKRKC 120 ALSENVLSGK CSETSGQCHC SKRRKQRVKM VIRVPAMGTK IPDITPDNYS WRKYGQKPIK 180 GSPYPRGYYR CSSVKGCPAR KHVERALDEP NMLIVTYEGD HNHSLSNAQT NSLILESTLR 240 AKV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 1e-67 | WRKY family protein |