PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049759.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 286aa    MW: 32076 Da    PI: 10.1035
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049759.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.41.6e-122269249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 +i+ k+  qv+fskRr+g++KK     vL ++++a++i s  +k++++
  Oeu049759.1 22 KIDKKTSLQVSFSKRRKGLFKKVAKTRVLSGTDIAILIQSLGNKFFTF 69
                 69999******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MIVSNGIPEK KTKGKRKIEI QKIDKKTSLQ VSFSKRRKGL FKKVAKTRVL SGTDIAILIQ  60
SLGNKFFTFG EPSVESILNR CQFLDDAHNP VVDERGETFE EMLTRLRDKV SNRTSHNSVV  120
DEMGKNERKF RRENENLEKM KLGELGAFEE ILTGLRDESG GNVRQSHYDN VRVEKSSIGE  180
KRIGLTSYEG IKEKAKAAKE AAQDLQLREK ACMRETVLYI LTNLSLILKA VGEVALTNPN  240
FTHIQLPSLV EFGNPLINST IVGNSQNVQS ILFVIGLLRV LLQCN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-18M-type_MADS family protein