PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049281.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 478aa    MW: 54085.3 Da    PI: 4.9484
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049281.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.8e-18130176148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT eEd +l+ +v+q+G + W+ Ia++m  gR +kqc++rw+++l
      Oeu049281.1 130 KGQWTDEEDRRLISLVHQFGLRKWAVIAEEMV-GRAGKQCRERWNNHL 176
                      799*****************************.*************97 PP
2Myb_DNA-binding59.66.6e-19182224145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ WT++E+ +l++a+++lG++ W+ Ia++++ gRt++++k++w+
      Oeu049281.1 182 KDVWTEDEERRLIQAHERLGNR-WAEIAKYIP-GRTENSIKNHWN 224
                      578*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MEGGSEDSLS RILGNNPQLL HPGPPLSAID RFLWGHNTFS YQQNFNPLEN QPALNGISHF  60
PSNEVNQFHN FSSNGTTSNY TTGKPSFIEG LQHEKQTSGE NLSVNVIPAP VNPDRKEKRE  120
NSYSSGYQIK GQWTDEEDRR LISLVHQFGL RKWAVIAEEM VGRAGKQCRE RWNNHLRPHI  180
KKDVWTEDEE RRLIQAHERL GNRWAEIAKY IPGRTENSIK NHWNATKRRQ ISRRNIKKLK  240
GDGRQSTLLQ DYIIKMYFSN GSTSTNSNSG TNTTAANLSN AGTPLSDDDD STPFFSFESC  300
NDEMDFMKTL FENNQSIDSI PVDHCQPMNP TEGTSKNTYS FNSDENYNHP TIFFTSPEIL  360
QTTDSQLPAV EYVENDLFHS APNPMGNKFF PSDNSDLIME FNSNFRSVET EASQIYPDEL  420
YFSYQWDGGN AGNVNSTTNL PTIDQGTTFG STMETDLMDM VSSSQLPPQL SPYNGFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.13e-54MYB family protein