PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu049246.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 550aa MW: 61257.8 Da PI: 8.3372

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu049246.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l++av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l Oeu049246.1 59 KGGWTPEEDDTLKRAVAAYRGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	63.6	3.9e-20	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde++v++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l Oeu049246.1 111 KGPWTPEEDEKIVELVAKYGPTKWSIIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	48.9	1.5e-15	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l+ a++ +G++ W+ a+ ++ gRt++ +k++w++ Oeu049246.1 163 KDAWTLEEELTLLGAHRTHGNK-WAELAKLLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MAEVKPEDVC PDNKQSTTVT RSSVSENSGS AALKSPGISS PTSISPSHRR TTGPIRRAKG 60 GWTPEEDDTL KRAVAAYRGK SWKKIAEFFP DRSEVQCLHR WQKVLNPELV KGPWTPEEDE 120 KIVELVAKYG PTKWSIIAKS LPGRIGKQCR ERWHNHLNPN IKKDAWTLEE ELTLLGAHRT 180 HGNKWAELAK LLPGRTDNAI KNHWNSSLKK KLDFYLATGN LPPVTKNVPQ NGSRVVNRTV 240 SIGEDLVCAN KGPDSTALVS SGAVDTCKIE DGKDKLETTN EVHDRAGSSS DPRNESADLE 300 GATFESMTSE VNPVNSSTEC RFERCGARRV VDQYRITESS LHNNIPLYGT LYYEPPEIDS 360 NLPNISQMHS ESDISPITSP VTFFTPPSME GGNLFAQTPE SILKIAAKSF PNTPSILRRR 420 KSGSQLSAPV SKNCRVDREA FEETCQSTSE YDRNQMNSPK NMELQELSLH RDLSGEVDIG 480 LCNGKSYNLS PPYRLRSKRT SVLKSVEKQL EFAFNMEQEG CDQNIKSEDS TVRGIPPVTK 540 FVYTRQKRL*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MAEVKPEDVC PDNKQSTTVT RSSVSENSGS AALKSPGISS PTSISPSHRR TTGPIRRAKG  60
GWTPEEDDTL KRAVAAYRGK SWKKIAEFFP DRSEVQCLHR WQKVLNPELV KGPWTPEEDE  120
KIVELVAKYG PTKWSIIAKS LPGRIGKQCR ERWHNHLNPN IKKDAWTLEE ELTLLGAHRT  180
HGNKWAELAK LLPGRTDNAI KNHWNSSLKK KLDFYLATGN LPPVTKNVPQ NGSRVVNRTV  240
SIGEDLVCAN KGPDSTALVS SGAVDTCKIE DGKDKLETTN EVHDRAGSSS DPRNESADLE  300
GATFESMTSE VNPVNSSTEC RFERCGARRV VDQYRITESS LHNNIPLYGT LYYEPPEIDS  360
NLPNISQMHS ESDISPITSP VTFFTPPSME GGNLFAQTPE SILKIAAKSF PNTPSILRRR  420
KSGSQLSAPV SKNCRVDREA FEETCQSTSE YDRNQMNSPK NMELQELSLH RDLSGEVDIG  480
LCNGKSYNLS PPYRLRSKRT SVLKSVEKQL EFAFNMEQEG CDQNIKSEDS TVRGIPPVTK  540
FVYTRQKRL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-145	MYB family protein