PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048782.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 674aa    MW: 75345 Da    PI: 6.7902
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048782.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS426.81.7e-1302916571373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  lv+ L++c+ea++ ++ +++++++arl elasp+g+p++RlaayfteALa r ar ++++++   p+e + +  +++ +al++++evsP++kf h+t 
  Oeu048782.1 291 LVNFLVACVEAIRLKNIANINHFIARLGELASPRGSPIRRLAAYFTEALALRAARLWPHIFHVTIPREFD-QVDDTSGTALRILNEVSPFPKFIHFTS 387
                  5789***********************************************************9999998.45666778999**************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  N+ +l+a+eg+++vHiiDfdi+qGlQWp+L+q+Las++++p ++RiTgvg+    sk+el etg+rLa fA++l++ fef++ v++rled++l++L+v
  Oeu048782.1 388 NEILLRAFEGKDHVHIIDFDIKQGLQWPSLFQSLASKTNPPSHVRITGVGE----SKQELIETGNRLAGFAAALNLAFEFHP-VVDRLEDVRLWMLHV 480
                  ***************************************************....***************************.7************** PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  k+ E++aVn+v+q+h+ll +s+  +   +++L l++s++P vvv++eqea+hn++ + +rf+++l++ysa+fdsl++ lp++s  rik+E++ ++rei
  Oeu048782.1 481 KESETVAVNCVFQIHKLLYDSTGRTL--RDFLGLIRSTNPLVVVMSEQEAEHNETLLERRFSNSLKFYSAIFDSLDSILPADSPLRIKIEEM-FAREI 575
                  ******************88877766..89**************************************************************.***** PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                  +n++aceg++r+erhe+++kWr+ +e+ GF+   ++e++  q ++ll++++ d y+ve   ++ ++l+l W d+pL++vSaW
  Oeu048782.1 576 RNIIACEGRDRVERHEKFGKWRQLMEQGGFQCSGINERELLQGQMLLKMYSCDNYKVEkqgQDGNALTLSWLDQPLYTVSAW 657
                  ***************************************************999****5555588999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MLAGCSSTLL SPRHRLRSET SGQFQVCHLP SMSTQRLDLP CSFGRKDAPR SSQSVRPVGL  60
SIEKPIEAKT TNCSLRQNIK LPPSSTTEGR RESNDEFWEK SKRKRYAEEG SYDEQFGMNR  120
VKRKRGSSGK SEDCEEEGGN LSLGHLGGGN LWFHPGFDVQ RSVPLAGLNP PQVPFSLSCS  180
GEEERVCFVP SNVIAPQLPP LSNSPWLEPI GNKITYLGDK NAETSQGPAQ EGSRSSSTSS  240
ESGRLVLRLN ENPGEHETGN GSRPPNPRDR VEIVAGQNGE NNHRERDDIE LVNFLVACVE  300
AIRLKNIANI NHFIARLGEL ASPRGSPIRR LAAYFTEALA LRAARLWPHI FHVTIPREFD  360
QVDDTSGTAL RILNEVSPFP KFIHFTSNEI LLRAFEGKDH VHIIDFDIKQ GLQWPSLFQS  420
LASKTNPPSH VRITGVGESK QELIETGNRL AGFAAALNLA FEFHPVVDRL EDVRLWMLHV  480
KESETVAVNC VFQIHKLLYD STGRTLRDFL GLIRSTNPLV VVMSEQEAEH NETLLERRFS  540
NSLKFYSAIF DSLDSILPAD SPLRIKIEEM FAREIRNIIA CEGRDRVERH EKFGKWRQLM  600
EQGGFQCSGI NERELLQGQM LLKMYSCDNY KVEKQGQDGN ALTLSWLDQP LYTVSAWAPA  660
DIAGSSSSYS QPT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102125KRKRYAEEGSYDEQFGMNRVKRKR
2103126KRKRYAEEGSYDEQFGMNRVKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein