PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048712.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 180aa    MW: 20113.2 Da    PI: 7.5812
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048712.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000433456123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C+ C++ F++   L  H++ H
  Oeu048712.1 34 YDCTFCKRGFTNAQALGGHMNIH 56
                 88*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVPGKHNNSQ KSSEENCNQS KRVCEESPSV SRSYDCTFCK RGFTNAQALG GHMNIHRKDR  60
AKNKKKNLDQ SSMNSAGYFP AVSSEDPRQK TIYYTGMGAE VRFQVYLPSS NPYTTNEINH  120
LASSNPNDLS SVWRPQRFTL HDDHLDANLS LRIGPAVVED GQGRNENEVD LELRLGHDP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16167AKNKKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-16C2H2 family protein