PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu048536.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 373aa MW: 41340.2 Da PI: 5.9664

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu048536.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.8	8.3e-07	10	50	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++ C+ +++ +++ fC+ + +lC+ C H + H Oeu048536.1 10 AKLCDSCKSSPASVFCHADTAFLCHGCDARVHDSdevashH 50 678**************************999666666644 PP
2	zf-B_box	23.7	9.8e-08	54	98	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C+ +e+ +++ C+ + lC++C +H H++ p+ Oeu048536.1 54 LVCEVCEQAPAIVTCKADAAALCATCDRDIHCAnplarrHERLPI 98 68*****************************65677777888775 PP
3	CCT	70.4	4.5e-24	317	361	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRYkeKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++e Oeu048536.1 317 REARVLRYKEKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSE 361 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MGGKSWSLKA KLCDSCKSSP ASVFCHADTA FLCHGCDARV HDSDEVASHH ARVLVCEVCE 60 QAPAIVTCKA DAAALCATCD RDIHCANPLA RRHERLPIVS FYKASQVNNN NENKYFSEDE 120 AEAASWLLPN PHTKGGTTED DDADSSKYKS SEYLFSDMDP YLDLDIISGE NMNDQKKSQY 180 ISDGVVPVQN KNDFQQNHFQ GSVVDGFPTY DMDYNTGSKP FMYNFSSQSV TQSIHDSSYV 240 HLFYNTDVPL GCSLYKCTLI DLILSGGVSG CKLCEENLVS SSSMEVCIVP DPGSITDVSN 300 TLVKNDEIPS PVSGIDREAR VLRYKEKRKN RKFEKTIRYA SRKAYAETRP RIKGRFAKRS 360 ENGVESLMVP TF*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MGGKSWSLKA KLCDSCKSSP ASVFCHADTA FLCHGCDARV HDSDEVASHH ARVLVCEVCE  60
QAPAIVTCKA DAAALCATCD RDIHCANPLA RRHERLPIVS FYKASQVNNN NENKYFSEDE  120
AEAASWLLPN PHTKGGTTED DDADSSKYKS SEYLFSDMDP YLDLDIISGE NMNDQKKSQY  180
ISDGVVPVQN KNDFQQNHFQ GSVVDGFPTY DMDYNTGSKP FMYNFSSQSV TQSIHDSSYV  240
HLFYNTDVPL GCSLYKCTLI DLILSGGVSG CKLCEENLVS SSSMEVCIVP DPGSITDVSN  300
TLVKNDEIPS PVSGIDREAR VLRYKEKRKN RKFEKTIRYA SRKAYAETRP RIKGRFAKRS  360
ENGVESLMVP TF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	3e-79	CO-like family protein