PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048430.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 142aa    MW: 16406 Da    PI: 10.1829
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048430.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding452.5e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l  +++++G  +W++ +++  + R++k+c++rw +yl
      Oeu048430.1 14 KGAWSEEEDNKLRAYIQRYGYWNWRLLPKYASLARCGKSCRLRWMNYL 61
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MVKPSKVDIN GVKKGAWSEE EDNKLRAYIQ RYGYWNWRLL PKYASLARCG KSCRLRWMNY  60
LKPGVKRGNY STEEVHLIME LHDKLGNKVD MIQESSPTKA NTRRDPLIVD DGPMTRSRAK  120
QVKQAMGLLV QETIDETMFR T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-33MYB family protein