PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu048300.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NAC

Protein Properties

Length: 432aa MW: 48225.6 Da PI: 6.9822

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu048300.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.7	4.5e-36	45	187	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgy 82 lp+G++F+Ptd+el+ e+L++kvegk ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ + + Oeu048300.1 45 LPAGVKFDPTDQELI-EHLEAKVEGKGskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETR 140 799**********.99****96665443333333666646******.555666799**************73334555544778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Oeu048300.1 141 WHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 187 ********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MNKNSQLGSV NSSDLIDAKL EEHQLSNQCP GCGHRLEGKP DWVGLPAGVK FDPTDQELIE 60 HLEAKVEGKG SKSHPLIDEF IPTIEGEDGI CYTHPEKLPG VTRDGLSRHF FHRPSKAYTT 120 GTRKRRKIQT ECDLQGGETR WHKTGKTRPV MVNGKQKGCK KILVLYTNFG KNRKPEKTNW 180 VMHQYHLGQH EEEKEGELVV SKIFYQTQPR QSNWSEKSSN FSSGAADVEA GNSDPNSRKD 240 SGNWPSKDII LHRDEFSAAA GASMSSYSAI DIQHLKAADH FSNILPFGKS FDEAGIGETS 300 ISREAPAGAA AAMGTCEERD IQPHHVTHEP QEHHQQHQQH HHHHHHQIAT TAYHISRPSH 360 SISTIIPPPF LHHTSITILD DNSFHVPRIM LPTESFQQQQ QPQQEHKLGG RSASGLEELI 420 MGCTSTDMKE N*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MNKNSQLGSV NSSDLIDAKL EEHQLSNQCP GCGHRLEGKP DWVGLPAGVK FDPTDQELIE  60
HLEAKVEGKG SKSHPLIDEF IPTIEGEDGI CYTHPEKLPG VTRDGLSRHF FHRPSKAYTT  120
GTRKRRKIQT ECDLQGGETR WHKTGKTRPV MVNGKQKGCK KILVLYTNFG KNRKPEKTNW  180
VMHQYHLGQH EEEKEGELVV SKIFYQTQPR QSNWSEKSSN FSSGAADVEA GNSDPNSRKD  240
SGNWPSKDII LHRDEFSAAA GASMSSYSAI DIQHLKAADH FSNILPFGKS FDEAGIGETS  300
ISREAPAGAA AAMGTCEERD IQPHHVTHEP QEHHQQHQQH HHHHHHQIAT TAYHISRPSH  360
SISTIIPPPF LHHTSITILD DNSFHVPRIM LPTESFQQQQ QPQQEHKLGG RSASGLEELI  420
MGCTSTDMKE N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-135	NAC family protein