PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047981.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 443aa    MW: 48572.1 Da    PI: 8.5316
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047981.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.26.7e-09107127425
                  ---SGGGGTS--TTTTT-SS-S CS
      zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                  +lC+++++ G Ck+Gd+Ck+ H
  Oeu047981.3 107 KLCNHWLQ-GNCKFGDNCKYLH 127
                  69******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
MNGGRRVYHR LGQSASSGYS DNKQQKVCYH WRQGKCSRFP CSFLHSELPG ANNGESSKRA  60
HQGFEADSSQ GGGLRRSRNS NFNNTWGRVQ GQGGGSSSNM VVKKMEKLCN HWLQGNCKFG  120
DNCKYLHQWS TGDCFSLLTP LEGHQQALTG SNVNRSKYTN RIGTRSSLPG FRSDMASQVV  180
TGIALPMGLD KLYTGSQDES VRVWDCQSGQ VVGVVNVGGA VGCMLSEGPW LFVGLTNLVK  240
WISILLTYWA LSCVADGTIL AWKFNVATNC FEPAASLKGH TLAVVTLVVG ANRLYSGSMD  300
HSIRVWNLET LQCLQTLRGH TDVVMSVLCW DQFLLSSSLD KTIKVWVATE NGTLEATYTH  360
IEEHGVLTLC GMHDSEAKPV LFCSCNDNTI RVYDLPSFSE RAKIFSKKEV RAIHIGPSGL  420
FFTGDGSGQV RVWKWSAESV AI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.11e-164C3H family protein