PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047909.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 564aa MW: 63080.8 Da PI: 8.2531

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047909.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	79.6	3.3e-25	93	194	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f k+ltpsd++++g l++p+k+a+e+ + + s++l+ +d++g +W++++iyr++++r++l++GW++Fv++++L++gD+++F + ++ + Oeu047909.1 93 FSKKLTPSDTSTHGGLSVPRKCANECfppldmfQ--HLPSQDLVAKDLHGTEWSFRHIYRGQPKRHLLSSGWSSFVHSKKLNAGDTCIFFR--GKTSK 186 88**************************9653..445679********************************************3..37777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu047909.1 187 LFIGIRRA 194 899986 PP
2	Auxin_resp	90.6	2.8e-30	219	305	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafeted.sserrl...sGtvvgvsdldpvrWpnSkWrsLk 83 a ha+st+s F+v Y+P++s++eF++++++++ka +v + GmRfkm+fe+ + ++ r Gt++g++d+d +rWp+S+Wr++k Oeu047909.1 219 AFHAISTESLFNVHYYPWKSPAEFIIPYDQYMKAAEVDYGFGMRFKMQFESTEgFQVERSpkcGGTIIGIKDIDHIRWPGSEWRCIK 305 689*********************************************76634444434669*******************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MANVPRVGDK VFYFPQGHIE QVEACTSKDS DVPMPVYNVP YKILCKVVSV LLQAEPNTDE 60 AIAHITLVPQ KDGESSQHRT TPSIARESFI QSFSKKLTPS DTSTHGGLSV PRKCANECFP 120 PLDMFQHLPS QDLVAKDLHG TEWSFRHIYR GQPKRHLLSS GWSSFVHSKK LNAGDTCIFF 180 RGKTSKLFIG IRRAIKPENN TSVSLLSSQS IQHGVLSGAF HAISTESLFN VHYYPWKSPA 240 EFIIPYDQYM KAAEVDYGFG MRFKMQFEST EGFQVERSPK CGGTIIGIKD IDHIRWPGSE 300 WRCIKVKWDS AEEAAICPER VSPWSIDLIE IYKRKRKSIP PDSKKPQPVN PLFPFSVKDG 360 LTKNSVEHIH QRHAGVFQGQ EFGTVNAYNQ RPSTWLPAGD SGTCMLFGVN ILGNQPKVPS 420 PQFLVGSELN GSNLAPPPSS QADILETINV QERSDSNLKE ELYSCLHISR SCTKVLKYGT 480 ALGRSINLSH FNGYGELVSE LDKIFEFNGA LIDGSSNWRL SYTDGERDKM FGDCTWKEFR 540 AIVKKMFICP KEVADSAHAR API*

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MANVPRVGDK VFYFPQGHIE QVEACTSKDS DVPMPVYNVP YKILCKVVSV LLQAEPNTDE  60
AIAHITLVPQ KDGESSQHRT TPSIARESFI QSFSKKLTPS DTSTHGGLSV PRKCANECFP  120
PLDMFQHLPS QDLVAKDLHG TEWSFRHIYR GQPKRHLLSS GWSSFVHSKK LNAGDTCIFF  180
RGKTSKLFIG IRRAIKPENN TSVSLLSSQS IQHGVLSGAF HAISTESLFN VHYYPWKSPA  240
EFIIPYDQYM KAAEVDYGFG MRFKMQFEST EGFQVERSPK CGGTIIGIKD IDHIRWPGSE  300
WRCIKVKWDS AEEAAICPER VSPWSIDLIE IYKRKRKSIP PDSKKPQPVN PLFPFSVKDG  360
LTKNSVEHIH QRHAGVFQGQ EFGTVNAYNQ RPSTWLPAGD SGTCMLFGVN ILGNQPKVPS  420
PQFLVGSELN GSNLAPPPSS QADILETINV QERSDSNLKE ELYSCLHISR SCTKVLKYGT  480
ALGRSINLSH FNGYGELVSE LDKIFEFNGA LIDGSSNWRL SYTDGERDKM FGDCTWKEFR  540
AIVKKMFICP KEVADSAHAR API*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	1e-125	ARF family protein