PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047615.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 273aa    MW: 30438.8 Da    PI: 5.968
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047615.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.21.6e-261059251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 +ien   rq+tfskRr+g+lKKA+EL vLC+aevaviifs+tgkl+e+ss
  Oeu047615.1 10 KIENVNSRQITFSKRRTGLLKKAHELAVLCEAEVAVIIFSNTGKLFEFSS 59
                 69**********************************************96 PP
2K-box58.53e-20891571987
        K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                  +e++ Lk e+e+L +++R+llG+dL+ +s++eL  LeqqL+++l +i+++K++lll+q+ ++++  +e 
  Oeu047615.1  89 KEVDLLKLEMEKLTSKHRQLLGKDLTGMSVQELGALEQQLNEGLLSIKERKEKLLLQQLAQSKMLVEEF 157
                  799************************************************************988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGRGKIDIRK IENVNSRQIT FSKRRTGLLK KAHELAVLCE AEVAVIIFSN TGKLFEFSSS  60
DMKRILSRYY ECRGPIEVLT PAVNPEEPKE VDLLKLEMEK LTSKHRQLLG KDLTGMSVQE  120
LGALEQQLNE GLLSIKERKE KLLLQQLAQS KMLVEEFKGF FASTGQLAPL VINDTPMEKN  180
DSESKGGSGS RETENSWLDD EIYDTTLTLW PTSSVCRKRK MSSGEASTND VLYGSRLRDR  240
EITSYIGTAG VEAAAIFSFC NEISVQPGTW CS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.16e-49MIKC_MADS family protein