PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu047574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 317aa MW: 35462 Da PI: 5.2166 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 9.7e-16 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ + G g+W+ Iar g+ R++k+c++rw +yl Oeu047574.1 22 KGLWSPEEDEKLMNYMLMNGQGCWSDIARNAGLQRCGKSCRLRWINYL 69 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.4e-16 | 75 | 117 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++ +E+el+++++ lG++ W+ Ia++++ gRt++++k++w+ Oeu047574.1 75 RGAFSSQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWN 117 89********************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 317 aa Download sequence |
MRKPGDQMVK EKLNNNKDKL RKGLWSPEED EKLMNYMLMN GQGCWSDIAR NAGLQRCGKS 60 CRLRWINYLR PDLKRGAFSS QEEELIIHLH SILGNRWSQI AARLPGRTDN EIKNFWNSSV 120 KKRLKNNNNN STSSQDSISE PRGAVMQGLI PMNGYDIATM YMDSTSSSSS SMQAMVLNSQ 180 FNPFPPMDNK FNVVNGTIAG SFDFSTCLQE VNMANRGVGQ DCGVMEPYVM GLVNELAVPA 240 LQGTVTEPNN AVYDHIFDTK ANINSQLNNS TESIKVEDIV GIENHWQGDS FKMGELDWEG 300 LLANVSSLPF LDFQVE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G08500.1 | 9e-65 | MYB family protein |